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How it works

How the engine works.

One engine for computational biology: Inflexa plans the analysis with you, runs every step in a sandbox and signs a record of how each result was made. On your machine or in Inflexa Cloud.

Four steps

Ask, approve, run, defend.

The agent does the running. You do the deciding.

  1. Ask

    Describe the biology in plain language. Inflexa reads your data profile and the literature before it proposes anything.

    You decide the question
    localhost · Inflexa Pro

    Question: Which pathways separate responders from non-responders in GSE109142?

    Plan: Responder pathways with confounder adjustment. Steps: QC and cohort audit, Confounder-adjusted DE, Immune deconvolution, IPTW sensitivity, GSEA, concordant only.

    Findings: 688 pathways hold after the weighting; CXCL13 marks non-responders.

    Sessions built from public datasets: GSE109142, PROTECT pediatric ulcerative colitis.

  2. Approve

    You get a plan with every method and parameter laid out. Nothing runs until you approve it.

    You decide the plan
  3. Run

    Each step runs in a sandbox, and independent steps run side by side. Change course at any point.

    You decide when to change course
  4. Defend

    Results arrive with the record of how they were made. Ask any output where it came from.

    You decide what the biology means
The engine

The six parts behind the four steps.

Each part has a page of its own.

  • Analytics

    How a plan becomes a run you can defend.

  • Provenance

    Ask any file where it came from.

  • Reporting

    Dossiers built in the same conversation.

  • Skills

    Open packs of encoded expertise.

  • Databases

    Live lookups, cited at the source.

  • Sandbox

    A locked container with the stack inside.

Products

One engine, three ways to run it.

The planner, the sandbox, the signed record, the skill packs and the database connections are the same in every product. Choose where the work runs and how you like to work.

  • On your machine

    Inflexa CLI

    Open source, in your terminal.

  • On your machine

    Inflexa ProNew

    A full workspace, served from your machine.

  • In the cloud

    Inflexa Cloud

    Your team's workspace, with compute.

Start with a question you already have.

Install the CLI and pay nobody but your model provider, open a free Cloud account, or talk to us about Pro for your team.